Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc28bQ8CEG5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Gm11927-201ENSMUST00000118472 759 ntBASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc28bQ8CEG5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc28bQ8CEG5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Mir6349-201ENSMUST00000184059 97 ntBASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc28bQ8CEG5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc28bQ8CEG5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms