Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ccdc60Q8C4J0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Gm13836-201ENSMUST00000121159 501 ntBASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC21.49■■□□□ 1.03
Ccdc60Q8C4J0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Mir1668-201ENSMUST00000184114 107 ntBASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 AC134329.2-201ENSMUST00000217897 428 ntBASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Gm18032-201ENSMUST00000222541 538 ntBASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ccdc60Q8C4J0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ccdc60Q8C4J0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms