Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sh3rf2Q8BZT2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sh3rf2Q8BZT2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sh3rf2Q8BZT2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Sh3rf2Q8BZT2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Sh3rf2Q8BZT2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sh3rf2Q8BZT2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sh3rf2Q8BZT2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sh3rf2Q8BZT2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sh3rf2Q8BZT2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Gm44450-201ENSMUST00000199528 114 ntBASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms