Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col16a1Q8BLX7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Gm2213-201ENSMUST00000197485 688 ntBASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col16a1Q8BLX7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 CT943659.1-201ENSMUST00000215459 326 ntBASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col16a1Q8BLX7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Gm13418-201ENSMUST00000119097 944 ntBASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.08■■□□□ 1.13
Col16a1Q8BLX7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col16a1Q8BLX7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col16a1Q8BLX7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Gm4535-201ENSMUST00000182274 558 ntBASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Gm10355-201ENSMUST00000097146 517 ntBASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col16a1Q8BLX7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms