Protein–RNA interactions for Protein: Q8BJM3

R3hcc1l, Coiled-coil domain-containing protein R3HCC1L, mousemouse

Known RBP Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1lQ8BJM3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Gm38027-201ENSMUST00000192315 235 ntBASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
R3hcc1lQ8BJM3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Gm7638-201ENSMUST00000121348 967 ntBASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.6■□□□□ 0.25
R3hcc1lQ8BJM3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
R3hcc1lQ8BJM3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
R3hcc1lQ8BJM3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
R3hcc1lQ8BJM3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
R3hcc1lQ8BJM3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
R3hcc1lQ8BJM3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
R3hcc1lQ8BJM3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Gm12085-201ENSMUST00000119263 940 ntBASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
R3hcc1lQ8BJM3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hcc1lQ8BJM3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hcc1lQ8BJM3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
R3hcc1lQ8BJM3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms