Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Mir5122-201ENSMUST00000175004 89 ntBASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh20Q8BIZ0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Gm37055-201ENSMUST00000191866 133 ntBASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh20Q8BIZ0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdh20Q8BIZ0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh20Q8BIZ0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh20Q8BIZ0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms