Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc40Q8BI79 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc40Q8BI79 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc40Q8BI79 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc40Q8BI79 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc40Q8BI79 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc40Q8BI79 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc40Q8BI79 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms