Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.27■□□□□ 0.19
Trim23Q8BGX0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trim23Q8BGX0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim23Q8BGX0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim23Q8BGX0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim23Q8BGX0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim23Q8BGX0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim23Q8BGX0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim23Q8BGX0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Gm23634-201ENSMUST00000175071 91 ntBASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim23Q8BGX0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim23Q8BGX0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim23Q8BGX0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms