Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
U2af1l4Q8BGJ9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Gm17807-201ENSMUST00000186869 298 ntBASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
U2af1l4Q8BGJ9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
U2af1l4Q8BGJ9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.83■□□□□ 0.77
U2af1l4Q8BGJ9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
U2af1l4Q8BGJ9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
U2af1l4Q8BGJ9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
U2af1l4Q8BGJ9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
U2af1l4Q8BGJ9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
U2af1l4Q8BGJ9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
U2af1l4Q8BGJ9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Gm25925-201ENSMUST00000158314 306 ntBASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
U2af1l4Q8BGJ9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
U2af1l4Q8BGJ9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms