Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Gm23935-201ENSMUST00000102303 57 ntBASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Gm24270-201ENSMUST00000102326 57 ntBASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Gm13418-201ENSMUST00000119097 944 ntBASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Gm24245-201ENSMUST00000157318 57 ntBASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Gm25745-201ENSMUST00000174945 133 ntBASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trnp1Q80ZI1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trnp1Q80ZI1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trnp1Q80ZI1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trnp1Q80ZI1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Trnp1Q80ZI1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trnp1Q80ZI1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Gm14494-201ENSMUST00000118786 435 ntBASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Gm12260-201ENSMUST00000122447 411 ntBASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trnp1Q80ZI1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Gm15590-201ENSMUST00000078419 552 ntBASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trnp1Q80ZI1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Gm15173-201ENSMUST00000122049 433 ntBASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trnp1Q80ZI1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trnp1Q80ZI1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms