Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Gm27742-201ENSMUST00000184667 60 ntBASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nrde2Q80XC6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Gm45328-201ENSMUST00000210942 917 ntBASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nrde2Q80XC6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Mir770-201ENSMUST00000103252 94 ntBASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Gm24589-201ENSMUST00000116692 94 ntBASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Gm27357-201ENSMUST00000183754 135 ntBASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Gm10566-201ENSMUST00000086739 996 ntBASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nrde2Q80XC6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nrde2Q80XC6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.08■□□□□ 0.32
Nrde2Q80XC6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nrde2Q80XC6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nrde2Q80XC6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Nrde2Q80XC6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms