Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp6nlQ80XC3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Gm11452-201ENSMUST00000122376 690 ntBASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp6nlQ80XC3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp6nlQ80XC3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Gm10052-201ENSMUST00000168019 960 ntBASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Gm7729-201ENSMUST00000050143 801 ntBASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp6nlQ80XC3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Gm13312-201ENSMUST00000119631 718 ntBASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp6nlQ80XC3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp6nlQ80XC3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms