Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Srrm3Q80WV7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Gm27741-201ENSMUST00000185060 237 ntBASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.58■□□□□ 0.4
Srrm3Q80WV7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Srrm3Q80WV7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srrm3Q80WV7 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Srrm3Q80WV7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srrm3Q80WV7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srrm3Q80WV7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms