Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.41■□□□□ 0.7
Prpf40bQ80W14 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Gm10566-201ENSMUST00000086739 996 ntBASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf40bQ80W14 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Gm27459-201ENSMUST00000184860 107 ntBASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Gm45328-201ENSMUST00000210942 917 ntBASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf40bQ80W14 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prpf40bQ80W14 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Olfr129-201ENSMUST00000122318 993 ntBASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf40bQ80W14 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf40bQ80W14 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Gm37935-201ENSMUST00000192012 982 ntBASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf40bQ80W14 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms