Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Psmb5-202ENSMUST00000227257 622 ntBASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Rpap1Q80TE0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rpap1Q80TE0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rpap1Q80TE0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
Rpap1Q80TE0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Rpap1Q80TE0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Gm7230-201ENSMUST00000173026 815 ntBASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rpap1Q80TE0 Gm15442-201ENSMUST00000117905 1527 ntBASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Gm13418-201ENSMUST00000119097 944 ntBASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Gm15467-201ENSMUST00000120582 445 ntBASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Gm43575-201ENSMUST00000196420 516 ntBASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rpap1Q80TE0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Gm25745-201ENSMUST00000174945 133 ntBASIC26.04■■□□□ 1.76
Rpap1Q80TE0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rpap1Q80TE0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Gm15173-201ENSMUST00000122049 433 ntBASIC26.03■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms