Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Gm24589-201ENSMUST00000116692 94 ntBASIC18.44■□□□□ 0.54
Ush1gQ80T11 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.44■□□□□ 0.54
Ush1gQ80T11 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Gm18115-201ENSMUST00000221209 621 ntBASIC18.44■□□□□ 0.54
Ush1gQ80T11 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ush1gQ80T11 Actl10-202ENSMUST00000226583 1501 ntBASIC18.44■□□□□ 0.54
Ush1gQ80T11 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.43■□□□□ 0.54
Ush1gQ80T11 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.43■□□□□ 0.54
Ush1gQ80T11 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Gm10566-201ENSMUST00000086739 996 ntBASIC18.43■□□□□ 0.54
Ush1gQ80T11 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.43■□□□□ 0.54
Ush1gQ80T11 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ush1gQ80T11 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Mzt1-203ENSMUST00000227948 952 ntBASIC18.42■□□□□ 0.54
Ush1gQ80T11 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ush1gQ80T11 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ush1gQ80T11 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.41■□□□□ 0.54
Ush1gQ80T11 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ush1gQ80T11 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.4■□□□□ 0.54
Ush1gQ80T11 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ush1gQ80T11 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ush1gQ80T11 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ush1gQ80T11 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.39■□□□□ 0.53
Ush1gQ80T11 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.39■□□□□ 0.53
Ush1gQ80T11 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ush1gQ80T11 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ush1gQ80T11 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ush1gQ80T11 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms