Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Gm24589-201ENSMUST00000116692 94 ntBASIC15.52■□□□□ 0.08
Pif1Q80SX8 Olfr129-201ENSMUST00000122318 993 ntBASIC15.52■□□□□ 0.08
Pif1Q80SX8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.52■□□□□ 0.08
Pif1Q80SX8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.52■□□□□ 0.08
Pif1Q80SX8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.52■□□□□ 0.08
Pif1Q80SX8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pif1Q80SX8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pif1Q80SX8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.51■□□□□ 0.07
Pif1Q80SX8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Gm18115-201ENSMUST00000221209 621 ntBASIC15.51■□□□□ 0.07
Pif1Q80SX8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pif1Q80SX8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pif1Q80SX8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pif1Q80SX8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.5■□□□□ 0.07
Pif1Q80SX8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.49■□□□□ 0.07
Pif1Q80SX8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.49■□□□□ 0.07
Pif1Q80SX8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.49■□□□□ 0.07
Pif1Q80SX8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pif1Q80SX8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms