Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdh8Q7TSK3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdh8Q7TSK3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdh8Q7TSK3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdh8Q7TSK3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdh8Q7TSK3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms