Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ctdp1Q7TSG2 Dancr-204ENSMUST00000132389 2347 ntBASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Gm22240-201ENSMUST00000175225 82 ntBASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ctdp1Q7TSG2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ctdp1Q7TSG2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctdp1Q7TSG2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctdp1Q7TSG2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctdp1Q7TSG2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctdp1Q7TSG2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ctdp1Q7TSG2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.39■□□□□ 0.53
Ctdp1Q7TSG2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ctdp1Q7TSG2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ctdp1Q7TSG2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms