Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rfx4Q7TNK1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rfx4Q7TNK1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rfx4Q7TNK1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Rfx4Q7TNK1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rfx4Q7TNK1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Gm7291-201ENSMUST00000199147 382 ntBASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rfx4Q7TNK1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.19■□□□□ 0.18
Rfx4Q7TNK1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms