Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.47■□□□□ 0.39
Cspg5Q71M36 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cspg5Q71M36 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cspg5Q71M36 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.46■□□□□ 0.39
Cspg5Q71M36 Mir1668-201ENSMUST00000184114 107 ntBASIC17.46■□□□□ 0.39
Cspg5Q71M36 Gm10566-201ENSMUST00000086739 996 ntBASIC17.46■□□□□ 0.39
Cspg5Q71M36 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cspg5Q71M36 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cspg5Q71M36 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Cspg5Q71M36 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Cspg5Q71M36 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Mir3081-201ENSMUST00000175305 84 ntBASIC17.45■□□□□ 0.38
Cspg5Q71M36 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg5Q71M36 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Gm6623-201ENSMUST00000173570 544 ntBASIC17.44■□□□□ 0.38
Cspg5Q71M36 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Cspg5Q71M36 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.43■□□□□ 0.38
Cspg5Q71M36 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Gm24589-201ENSMUST00000116692 94 ntBASIC17.43■□□□□ 0.38
Cspg5Q71M36 Gm11950-201ENSMUST00000121615 838 ntBASIC17.43■□□□□ 0.38
Cspg5Q71M36 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.43■□□□□ 0.38
Cspg5Q71M36 Gm29791-202ENSMUST00000207888 369 ntBASIC17.43■□□□□ 0.38
Cspg5Q71M36 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cspg5Q71M36 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg5Q71M36 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg5Q71M36 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms