Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.36■□□□□ 0.85
Sned1Q70E20 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.36■□□□□ 0.85
Sned1Q70E20 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sned1Q70E20 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sned1Q70E20 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.35■□□□□ 0.85
Sned1Q70E20 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Sned1Q70E20 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.35■□□□□ 0.85
Sned1Q70E20 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sned1Q70E20 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sned1Q70E20 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.35■□□□□ 0.85
Sned1Q70E20 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.35■□□□□ 0.85
Sned1Q70E20 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Mir8117-201ENSMUST00000184773 107 ntBASIC20.35■□□□□ 0.85
Sned1Q70E20 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.35■□□□□ 0.85
Sned1Q70E20 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.35■□□□□ 0.85
Sned1Q70E20 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.35■□□□□ 0.85
Sned1Q70E20 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sned1Q70E20 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sned1Q70E20 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.34■□□□□ 0.85
Sned1Q70E20 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Gm5186-201ENSMUST00000218781 920 ntBASIC20.34■□□□□ 0.85
Sned1Q70E20 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.34■□□□□ 0.85
Sned1Q70E20 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sned1Q70E20 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Sned1Q70E20 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sned1Q70E20 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sned1Q70E20 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sned1Q70E20 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.33■□□□□ 0.85
Sned1Q70E20 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.33■□□□□ 0.84
Sned1Q70E20 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.33■□□□□ 0.84
Sned1Q70E20 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.33■□□□□ 0.84
Sned1Q70E20 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.33■□□□□ 0.84
Sned1Q70E20 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sned1Q70E20 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.32■□□□□ 0.84
Sned1Q70E20 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.32■□□□□ 0.84
Sned1Q70E20 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sned1Q70E20 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.31■□□□□ 0.84
Sned1Q70E20 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.31■□□□□ 0.84
Sned1Q70E20 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.31■□□□□ 0.84
Sned1Q70E20 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sned1Q70E20 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.31■□□□□ 0.84
Sned1Q70E20 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Sned1Q70E20 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.31■□□□□ 0.84
Sned1Q70E20 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sned1Q70E20 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sned1Q70E20 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.3■□□□□ 0.84
Sned1Q70E20 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sned1Q70E20 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sned1Q70E20 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sned1Q70E20 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.3■□□□□ 0.84
Sned1Q70E20 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.3■□□□□ 0.84
Sned1Q70E20 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.3■□□□□ 0.84
Sned1Q70E20 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Sned1Q70E20 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sned1Q70E20 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sned1Q70E20 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.3■□□□□ 0.84
Sned1Q70E20 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms