Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Gm4535-201ENSMUST00000182274 558 ntBASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Gm10355-201ENSMUST00000097146 517 ntBASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nup188Q6ZQH8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Gm15173-201ENSMUST00000122049 433 ntBASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Auts2-212ENSMUST00000178555 309 ntBASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nup188Q6ZQH8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Gm13036-201ENSMUST00000117799 748 ntBASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nup188Q6ZQH8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nup188Q6ZQH8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Gm6550-201ENSMUST00000187574 993 ntBASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Psmb5-202ENSMUST00000227257 622 ntBASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Gm4459-201ENSMUST00000118750 468 ntBASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Nup188Q6ZQH8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nup188Q6ZQH8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms