Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Casc1Q6TDU8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Casc1Q6TDU8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Casc1Q6TDU8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Casc1Q6TDU8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Casc1Q6TDU8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.13■□□□□ 0.81
Casc1Q6TDU8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gm10418-201ENSMUST00000100943 576 ntBASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Mir5122-201ENSMUST00000175004 89 ntBASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Mir6982-201ENSMUST00000184354 68 ntBASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Casc1Q6TDU8 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Casc1Q6TDU8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.1■□□□□ 0.81
Casc1Q6TDU8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms