Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc46a1Q6PEM8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.83□□□□□ -0.03
Slc46a1Q6PEM8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a1Q6PEM8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a1Q6PEM8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc46a1Q6PEM8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Slc46a1Q6PEM8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Gm9013-201ENSMUST00000132939 882 ntBASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Gm5587-201ENSMUST00000206270 674 ntBASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Gm10566-201ENSMUST00000086739 996 ntBASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc46a1Q6PEM8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Gm26039-201ENSMUST00000158152 144 ntBASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Slc46a1Q6PEM8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Gm11355-201ENSMUST00000121120 306 ntBASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Slc46a1Q6PEM8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Slc46a1Q6PEM8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms