Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Snrnp40Q6PE01 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Gm44454-201ENSMUST00000198541 138 ntBASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Snrnp40Q6PE01 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44357-201ENSMUST00000195897 142 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm19658-201ENSMUST00000196231 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44367-201ENSMUST00000196836 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44350-201ENSMUST00000197197 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44390-201ENSMUST00000197533 144 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44313-201ENSMUST00000198018 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44486-201ENSMUST00000198508 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44314-201ENSMUST00000199263 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44394-201ENSMUST00000199558 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44484-201ENSMUST00000199873 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44466-201ENSMUST00000200264 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm44359-201ENSMUST00000200671 138 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.8□□□□□ -0.04
Snrnp40Q6PE01 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Snrnp40Q6PE01 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gm11594-201ENSMUST00000122313 162 ntBASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gm8000-201ENSMUST00000188378 592 ntBASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.78□□□□□ -0.04
Snrnp40Q6PE01 Gm10060-201ENSMUST00000212002 111 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms