Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
ShbQ6PD21 Gm8097-201ENSMUST00000117903 829 ntBASIC18.24■□□□□ 0.51
ShbQ6PD21 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
ShbQ6PD21 Mir3113-201ENSMUST00000175478 76 ntBASIC18.24■□□□□ 0.51
ShbQ6PD21 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ShbQ6PD21 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.23■□□□□ 0.51
ShbQ6PD21 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ShbQ6PD21 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.23■□□□□ 0.51
ShbQ6PD21 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.23■□□□□ 0.51
ShbQ6PD21 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ShbQ6PD21 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ShbQ6PD21 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.22■□□□□ 0.51
ShbQ6PD21 Gm4459-201ENSMUST00000118750 468 ntBASIC18.22■□□□□ 0.51
ShbQ6PD21 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.22■□□□□ 0.51
ShbQ6PD21 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.22■□□□□ 0.51
ShbQ6PD21 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ShbQ6PD21 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.22■□□□□ 0.51
ShbQ6PD21 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ShbQ6PD21 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ShbQ6PD21 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.21■□□□□ 0.51
ShbQ6PD21 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.21■□□□□ 0.51
ShbQ6PD21 Gm12497-201ENSMUST00000138778 237 ntBASIC18.21■□□□□ 0.51
ShbQ6PD21 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Mir8117-201ENSMUST00000184773 107 ntBASIC18.21■□□□□ 0.51
ShbQ6PD21 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ShbQ6PD21 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.2■□□□□ 0.5
ShbQ6PD21 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.2■□□□□ 0.5
ShbQ6PD21 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ShbQ6PD21 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShbQ6PD21 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShbQ6PD21 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ShbQ6PD21 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShbQ6PD21 Gm7222-201ENSMUST00000117512 906 ntBASIC18.19■□□□□ 0.5
ShbQ6PD21 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ShbQ6PD21 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.19■□□□□ 0.5
ShbQ6PD21 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.19■□□□□ 0.5
ShbQ6PD21 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.19■□□□□ 0.5
ShbQ6PD21 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms