Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Kdm3aQ6PCM1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Kdm3aQ6PCM1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm3aQ6PCM1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Kdm3aQ6PCM1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm3aQ6PCM1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Kdm3aQ6PCM1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.32■□□□□ 0.84
Kdm3aQ6PCM1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.31■□□□□ 0.84
Kdm3aQ6PCM1 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Kdm3aQ6PCM1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Kdm3aQ6PCM1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Kdm3aQ6PCM1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms