Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Mir6349-201ENSMUST00000184059 97 ntBASIC18.86■□□□□ 0.61
Abcf1Q6P542 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.85■□□□□ 0.61
Abcf1Q6P542 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Abcf1Q6P542 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.85■□□□□ 0.61
Abcf1Q6P542 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcf1Q6P542 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.84■□□□□ 0.61
Abcf1Q6P542 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.84■□□□□ 0.61
Abcf1Q6P542 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Gm6576-201ENSMUST00000169678 883 ntBASIC18.84■□□□□ 0.61
Abcf1Q6P542 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcf1Q6P542 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.84■□□□□ 0.61
Abcf1Q6P542 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Abcf1Q6P542 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Abcf1Q6P542 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Abcf1Q6P542 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Abcf1Q6P542 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.83■□□□□ 0.6
Abcf1Q6P542 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Abcf1Q6P542 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcf1Q6P542 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.81■□□□□ 0.6
Abcf1Q6P542 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms