Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm4Q6IRU2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tpm4Q6IRU2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm4Q6IRU2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm4Q6IRU2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm4Q6IRU2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tpm4Q6IRU2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms