Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Gm8520-201ENSMUST00000186517 868 ntBASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Krt39Q6IFX4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Gm13168-201ENSMUST00000121771 632 ntBASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Krt39Q6IFX4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.65■□□□□ 0.58
Krt39Q6IFX4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Krt39Q6IFX4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Krt39Q6IFX4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Krt39Q6IFX4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Krt39Q6IFX4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Gm43183-201ENSMUST00000200632 547 ntBASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Krt39Q6IFX4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Krt39Q6IFX4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Krt39Q6IFX4 Gm22240-201ENSMUST00000175225 82 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms