Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm10698-201ENSMUST00000182663 604 ntBASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhga7Q6DD96 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdhga7Q6DD96 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Gm15378-201ENSMUST00000121894 207 ntBASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdhga7Q6DD96 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdhga7Q6DD96 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdhga7Q6DD96 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Gm17661-201ENSMUST00000170317 270 ntBASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdhga7Q6DD96 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms