Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.48■□□□□ 0.23
Six3Q62233 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Gm13168-201ENSMUST00000121771 632 ntBASIC16.48■□□□□ 0.23
Six3Q62233 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.48■□□□□ 0.23
Six3Q62233 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Six3Q62233 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Six3Q62233 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Six3Q62233 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Six3Q62233 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Six3Q62233 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Mir1199-201ENSMUST00000117015 119 ntBASIC16.47■□□□□ 0.23
Six3Q62233 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Six3Q62233 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Six3Q62233 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.47■□□□□ 0.23
Six3Q62233 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Six3Q62233 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.46■□□□□ 0.23
Six3Q62233 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Six3Q62233 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Six3Q62233 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Six3Q62233 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Gm7638-201ENSMUST00000121348 967 ntBASIC16.46■□□□□ 0.23
Six3Q62233 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Six3Q62233 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.46■□□□□ 0.23
Six3Q62233 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six3Q62233 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Six3Q62233 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Six3Q62233 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Six3Q62233 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Gm38027-201ENSMUST00000192315 235 ntBASIC16.45■□□□□ 0.22
Six3Q62233 Gm9731-201ENSMUST00000209480 747 ntBASIC16.45■□□□□ 0.22
Six3Q62233 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Six3Q62233 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Six3Q62233 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Six3Q62233 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six3Q62233 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Six3Q62233 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.44■□□□□ 0.22
Six3Q62233 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six3Q62233 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.44■□□□□ 0.22
Six3Q62233 Gm27000-201ENSMUST00000182943 842 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms