Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
Six2Q62232 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.97■□□□□ 0.47
Six2Q62232 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.97■□□□□ 0.47
Six2Q62232 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Six2Q62232 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Six2Q62232 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Six2Q62232 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Six2Q62232 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.96■□□□□ 0.47
Six2Q62232 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Six2Q62232 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Six2Q62232 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.96■□□□□ 0.47
Six2Q62232 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.96■□□□□ 0.47
Six2Q62232 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.96■□□□□ 0.47
Six2Q62232 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Six2Q62232 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Six2Q62232 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.96■□□□□ 0.47
Six2Q62232 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Six2Q62232 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Six2Q62232 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Six2Q62232 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Six2Q62232 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.95■□□□□ 0.46
Six2Q62232 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Six2Q62232 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Six2Q62232 Gm30025-201ENSMUST00000218555 728 ntBASIC17.95■□□□□ 0.46
Six2Q62232 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Six2Q62232 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Six2Q62232 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Six2Q62232 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Six2Q62232 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.94■□□□□ 0.46
Six2Q62232 Gm11539-201ENSMUST00000119837 557 ntBASIC17.94■□□□□ 0.46
Six2Q62232 Gm13436-201ENSMUST00000120418 567 ntBASIC17.94■□□□□ 0.46
Six2Q62232 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.94■□□□□ 0.46
Six2Q62232 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Six2Q62232 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.94■□□□□ 0.46
Six2Q62232 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Six2Q62232 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Six2Q62232 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms