Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn9aQ62205 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm14822-201ENSMUST00000122247 291 ntBASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm9727-201ENSMUST00000161387 555 ntBASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn9aQ62205 Gm10175-201ENSMUST00000086013 645 ntBASIC19.84■□□□□ 0.77
Scn9aQ62205 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn9aQ62205 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scn9aQ62205 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn9aQ62205 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn9aQ62205 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn9aQ62205 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn9aQ62205 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scn9aQ62205 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn9aQ62205 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.83■□□□□ 0.77
Scn9aQ62205 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Scn9aQ62205 Gm15173-201ENSMUST00000122049 433 ntBASIC19.83■□□□□ 0.76
Scn9aQ62205 Gm25745-201ENSMUST00000174945 133 ntBASIC19.83■□□□□ 0.76
Scn9aQ62205 Gm4535-201ENSMUST00000182274 558 ntBASIC19.83■□□□□ 0.76
Scn9aQ62205 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.83■□□□□ 0.76
Scn9aQ62205 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.83■□□□□ 0.76
Scn9aQ62205 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Scn9aQ62205 Gm7506-201ENSMUST00000207758 815 ntBASIC19.83■□□□□ 0.76
Scn9aQ62205 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn9aQ62205 Gm10355-201ENSMUST00000097146 517 ntBASIC19.83■□□□□ 0.76
Scn9aQ62205 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.82■□□□□ 0.76
Scn9aQ62205 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Scn9aQ62205 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.82■□□□□ 0.76
Scn9aQ62205 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.82■□□□□ 0.76
Scn9aQ62205 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn9aQ62205 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Scn9aQ62205 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Scn9aQ62205 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.81■□□□□ 0.76
Scn9aQ62205 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Scn9aQ62205 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Gm6550-201ENSMUST00000187574 993 ntBASIC19.81■□□□□ 0.76
Scn9aQ62205 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scn9aQ62205 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn9aQ62205 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scn9aQ62205 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scn9aQ62205 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.79■□□□□ 0.76
Scn9aQ62205 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn9aQ62205 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Scn9aQ62205 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn9aQ62205 AC225888.1-201ENSMUST00000227184 728 ntBASIC19.79■□□□□ 0.76
Scn9aQ62205 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn9aQ62205 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Gm15590-201ENSMUST00000078419 552 ntBASIC19.79■□□□□ 0.76
Scn9aQ62205 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn9aQ62205 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Scn9aQ62205 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms