Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm12106-201ENSMUST00000116006 1200 ntBASIC12.39□□□□□ -0.43
Foxc1Q61572 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Mir8112-201ENSMUST00000184382 131 ntBASIC12.39□□□□□ -0.43
Foxc1Q61572 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Foxc1Q61572 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.38□□□□□ -0.43
Foxc1Q61572 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.38□□□□□ -0.43
Foxc1Q61572 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Foxc1Q61572 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Gm20614-201ENSMUST00000177106 632 ntBASIC12.38□□□□□ -0.43
Foxc1Q61572 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.38□□□□□ -0.43
Foxc1Q61572 Thoc7-209ENSMUST00000225325 765 ntBASIC12.38□□□□□ -0.43
Foxc1Q61572 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.38□□□□□ -0.43
Foxc1Q61572 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Foxc1Q61572 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.38□□□□□ -0.43
Foxc1Q61572 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxc1Q61572 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Foxc1Q61572 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.37□□□□□ -0.43
Foxc1Q61572 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gm24841-201ENSMUST00000158676 357 ntBASIC12.37□□□□□ -0.43
Foxc1Q61572 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gm8969-201ENSMUST00000199694 526 ntBASIC12.37□□□□□ -0.43
Foxc1Q61572 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.37□□□□□ -0.43
Foxc1Q61572 Gm3375-201ENSMUST00000203929 796 ntBASIC12.37□□□□□ -0.43
Foxc1Q61572 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Foxc1Q61572 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.36□□□□□ -0.43
Foxc1Q61572 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.36□□□□□ -0.43
Foxc1Q61572 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.36□□□□□ -0.43
Foxc1Q61572 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Foxc1Q61572 Gm10231-201ENSMUST00000181584 441 ntBASIC12.36□□□□□ -0.43
Foxc1Q61572 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms