Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.64■□□□□ 0.57
Ecm1Q61508 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ecm1Q61508 Gm18206-201ENSMUST00000207027 926 ntBASIC18.64■□□□□ 0.57
Ecm1Q61508 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.64■□□□□ 0.57
Ecm1Q61508 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.64■□□□□ 0.57
Ecm1Q61508 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.64■□□□□ 0.57
Ecm1Q61508 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ecm1Q61508 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ecm1Q61508 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.64■□□□□ 0.57
Ecm1Q61508 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ecm1Q61508 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ecm1Q61508 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ecm1Q61508 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44357-201ENSMUST00000195897 142 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm19658-201ENSMUST00000196231 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44367-201ENSMUST00000196836 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44350-201ENSMUST00000197197 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44390-201ENSMUST00000197533 144 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44313-201ENSMUST00000198018 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44486-201ENSMUST00000198508 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44314-201ENSMUST00000199263 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44394-201ENSMUST00000199558 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44484-201ENSMUST00000199873 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44466-201ENSMUST00000200264 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm44359-201ENSMUST00000200671 138 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.63■□□□□ 0.57
Ecm1Q61508 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ecm1Q61508 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.63■□□□□ 0.57
Ecm1Q61508 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ecm1Q61508 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Gm27525-201ENSMUST00000184465 107 ntBASIC18.62■□□□□ 0.57
Ecm1Q61508 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.62■□□□□ 0.57
Ecm1Q61508 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.62■□□□□ 0.57
Ecm1Q61508 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.62■□□□□ 0.57
Ecm1Q61508 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ecm1Q61508 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ecm1Q61508 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ecm1Q61508 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.61■□□□□ 0.57
Ecm1Q61508 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.61■□□□□ 0.57
Ecm1Q61508 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.61■□□□□ 0.57
Ecm1Q61508 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ecm1Q61508 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ecm1Q61508 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.6■□□□□ 0.57
Ecm1Q61508 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.6■□□□□ 0.57
Ecm1Q61508 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ecm1Q61508 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.6■□□□□ 0.57
Ecm1Q61508 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms