Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Phf7-203ENSMUST00000226565 1971 ntBASIC17.59■□□□□ 0.41
Smarcd1Q61466 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcd1Q61466 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.59■□□□□ 0.41
Smarcd1Q61466 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.58■□□□□ 0.41
Smarcd1Q61466 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Smarcd1Q61466 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Gm18115-201ENSMUST00000221209 621 ntBASIC17.58■□□□□ 0.4
Smarcd1Q61466 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smarcd1Q61466 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.57■□□□□ 0.4
Smarcd1Q61466 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Gm11336-201ENSMUST00000118168 334 ntBASIC17.57■□□□□ 0.4
Smarcd1Q61466 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.57■□□□□ 0.4
Smarcd1Q61466 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smarcd1Q61466 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Gm33142-201ENSMUST00000193913 867 ntBASIC17.56■□□□□ 0.4
Smarcd1Q61466 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smarcd1Q61466 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smarcd1Q61466 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms