Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Ift88Q61371 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.68■□□□□ 0.58
Ift88Q61371 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.68■□□□□ 0.58
Ift88Q61371 Gm43183-201ENSMUST00000200632 547 ntBASIC18.68■□□□□ 0.58
Ift88Q61371 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.68■□□□□ 0.58
Ift88Q61371 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Ift88Q61371 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ift88Q61371 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Ift88Q61371 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ift88Q61371 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ift88Q61371 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.67■□□□□ 0.58
Ift88Q61371 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ift88Q61371 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ift88Q61371 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.67■□□□□ 0.58
Ift88Q61371 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ift88Q61371 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.67■□□□□ 0.58
Ift88Q61371 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ift88Q61371 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ift88Q61371 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.66■□□□□ 0.58
Ift88Q61371 Gm17661-201ENSMUST00000170317 270 ntBASIC18.66■□□□□ 0.58
Ift88Q61371 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ift88Q61371 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ift88Q61371 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ift88Q61371 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ift88Q61371 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.66■□□□□ 0.58
Ift88Q61371 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 Gm37025-201ENSMUST00000195159 829 ntBASIC18.65■□□□□ 0.58
Ift88Q61371 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Ift88Q61371 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ift88Q61371 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ift88Q61371 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.64■□□□□ 0.57
Ift88Q61371 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ift88Q61371 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.64■□□□□ 0.57
Ift88Q61371 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms