Protein–RNA interactions for Protein: Q61136

Prpf4b, Serine/threonine-protein kinase PRP4 homolog, mousemouse

Known RBP Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf4bQ61136 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf4bQ61136 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.3■□□□□ 0.68
Prpf4bQ61136 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf4bQ61136 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Prpf4bQ61136 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf4bQ61136 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf4bQ61136 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf4bQ61136 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf4bQ61136 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf4bQ61136 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf4bQ61136 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf4bQ61136 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf4bQ61136 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf4bQ61136 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Prpf4bQ61136 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Prpf4bQ61136 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.27■□□□□ 0.67
Prpf4bQ61136 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.26■□□□□ 0.67
Prpf4bQ61136 Mir5122-201ENSMUST00000175004 89 ntBASIC19.26■□□□□ 0.67
Prpf4bQ61136 Gm37055-201ENSMUST00000191866 133 ntBASIC19.26■□□□□ 0.67
Prpf4bQ61136 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf4bQ61136 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.25■□□□□ 0.67
Prpf4bQ61136 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.25■□□□□ 0.67
Prpf4bQ61136 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf4bQ61136 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.25■□□□□ 0.67
Prpf4bQ61136 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf4bQ61136 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.24■□□□□ 0.67
Prpf4bQ61136 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms