Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm19658-201ENSMUST00000196231 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44367-201ENSMUST00000196836 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44350-201ENSMUST00000197197 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44390-201ENSMUST00000197533 144 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44313-201ENSMUST00000198018 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44486-201ENSMUST00000198508 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44454-201ENSMUST00000198541 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44314-201ENSMUST00000199263 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44394-201ENSMUST00000199558 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44484-201ENSMUST00000199873 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44466-201ENSMUST00000200264 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm44359-201ENSMUST00000200671 138 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Gm18195-201ENSMUST00000207604 706 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.46■□□□□ 0.55
Cln3Q61124 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 Rps4l-201ENSMUST00000071745 943 ntBASIC18.46■□□□□ 0.55
Cln3Q61124 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln3Q61124 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln3Q61124 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cln3Q61124 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln3Q61124 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cln3Q61124 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.54
Cln3Q61124 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cln3Q61124 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Gm15165-201ENSMUST00000118140 502 ntBASIC18.45■□□□□ 0.54
Cln3Q61124 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.45■□□□□ 0.54
Cln3Q61124 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.45■□□□□ 0.54
Cln3Q61124 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.45■□□□□ 0.54
Cln3Q61124 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.45■□□□□ 0.54
Cln3Q61124 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cln3Q61124 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.45■□□□□ 0.54
Cln3Q61124 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.45■□□□□ 0.54
Cln3Q61124 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.45■□□□□ 0.54
Cln3Q61124 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cln3Q61124 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.44■□□□□ 0.54
Cln3Q61124 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cln3Q61124 Gm2651-201ENSMUST00000203560 838 ntBASIC18.44■□□□□ 0.54
Cln3Q61124 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cln3Q61124 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.44■□□□□ 0.54
Cln3Q61124 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cln3Q61124 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cln3Q61124 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cln3Q61124 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.43■□□□□ 0.54
Cln3Q61124 Gm44430-201ENSMUST00000203376 995 ntBASIC18.43■□□□□ 0.54
Cln3Q61124 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.43■□□□□ 0.54
Cln3Q61124 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cln3Q61124 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Gm7862-201ENSMUST00000121461 292 ntBASIC18.42■□□□□ 0.54
Cln3Q61124 Gm6376-201ENSMUST00000209407 580 ntBASIC18.42■□□□□ 0.54
Cln3Q61124 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Cln3Q61124 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.42■□□□□ 0.54
Cln3Q61124 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cln3Q61124 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cln3Q61124 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.42■□□□□ 0.54
Cln3Q61124 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.41■□□□□ 0.54
Cln3Q61124 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.41■□□□□ 0.54
Cln3Q61124 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.41■□□□□ 0.54
Cln3Q61124 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cln3Q61124 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms