Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Ptch1Q61115 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Ptch1Q61115 Gm12497-201ENSMUST00000138778 237 ntBASIC24.32■■□□□ 1.48
Ptch1Q61115 Gm7507-201ENSMUST00000183053 1008 ntBASIC24.32■■□□□ 1.48
Ptch1Q61115 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Ptch1Q61115 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Ptch1Q61115 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ptch1Q61115 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC24.32■■□□□ 1.48
Ptch1Q61115 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC24.31■■□□□ 1.48
Ptch1Q61115 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 AC158982.1-201ENSMUST00000228377 901 ntBASIC24.31■■□□□ 1.48
Ptch1Q61115 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ptch1Q61115 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptch1Q61115 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptch1Q61115 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC24.3■■□□□ 1.48
Ptch1Q61115 Gm14057-201ENSMUST00000120631 482 ntBASIC24.3■■□□□ 1.48
Ptch1Q61115 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptch1Q61115 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ptch1Q61115 Gm37500-201ENSMUST00000192059 1443 ntBASIC24.3■■□□□ 1.48
Ptch1Q61115 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Ptch1Q61115 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptch1Q61115 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptch1Q61115 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ptch1Q61115 Gm9889-202ENSMUST00000206983 1577 ntBASIC24.29■■□□□ 1.48
Ptch1Q61115 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC24.29■■□□□ 1.48
Ptch1Q61115 Ndufaf2-202ENSMUST00000223734 556 ntBASIC24.29■■□□□ 1.48
Ptch1Q61115 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ptch1Q61115 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ptch1Q61115 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ptch1Q61115 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Ptch1Q61115 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Ptch1Q61115 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptch1Q61115 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Mir3113-201ENSMUST00000175478 76 ntBASIC24.27■■□□□ 1.48
Ptch1Q61115 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC24.27■■□□□ 1.48
Ptch1Q61115 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Ptch1Q61115 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
Ptch1Q61115 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC24.27■■□□□ 1.48
Ptch1Q61115 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ptch1Q61115 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptch1Q61115 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Gm45203-201ENSMUST00000206384 1831 ntBASIC24.26■■□□□ 1.47
Ptch1Q61115 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Ptch1Q61115 Gm15920-201ENSMUST00000118998 402 ntBASIC24.26■■□□□ 1.47
Ptch1Q61115 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC24.26■■□□□ 1.47
Ptch1Q61115 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
Ptch1Q61115 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptch1Q61115 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Ptch1Q61115 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Ptch1Q61115 AL590614.2-201ENSMUST00000225374 1937 ntBASIC24.25■■□□□ 1.47
Ptch1Q61115 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch1Q61115 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch1Q61115 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC24.25■■□□□ 1.47
Ptch1Q61115 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC24.25■■□□□ 1.47
Ptch1Q61115 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC24.25■■□□□ 1.47
Ptch1Q61115 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch1Q61115 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch1Q61115 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptch1Q61115 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC24.25■■□□□ 1.47
Ptch1Q61115 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC24.24■■□□□ 1.47
Ptch1Q61115 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Gm7222-201ENSMUST00000117512 906 ntBASIC24.24■■□□□ 1.47
Ptch1Q61115 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptch1Q61115 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms