Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Mir6982-201ENSMUST00000184354 68 ntBASIC17.11■□□□□ 0.33
Sdf4Q61112 Gm2274-201ENSMUST00000184539 609 ntBASIC17.11■□□□□ 0.33
Sdf4Q61112 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sdf4Q61112 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sdf4Q61112 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdf4Q61112 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sdf4Q61112 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sdf4Q61112 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.1■□□□□ 0.33
Sdf4Q61112 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Sdf4Q61112 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.1■□□□□ 0.33
Sdf4Q61112 Gm11539-201ENSMUST00000119837 557 ntBASIC17.1■□□□□ 0.33
Sdf4Q61112 Gm13436-201ENSMUST00000120418 567 ntBASIC17.1■□□□□ 0.33
Sdf4Q61112 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.1■□□□□ 0.33
Sdf4Q61112 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sdf4Q61112 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdf4Q61112 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Sdf4Q61112 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.09■□□□□ 0.33
Sdf4Q61112 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.09■□□□□ 0.33
Sdf4Q61112 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdf4Q61112 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sdf4Q61112 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdf4Q61112 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdf4Q61112 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdf4Q61112 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.08■□□□□ 0.32
Sdf4Q61112 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Gm16061-201ENSMUST00000122167 857 ntBASIC17.08■□□□□ 0.32
Sdf4Q61112 Gm13474-201ENSMUST00000122466 815 ntBASIC17.08■□□□□ 0.32
Sdf4Q61112 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.08■□□□□ 0.32
Sdf4Q61112 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.08■□□□□ 0.32
Sdf4Q61112 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.08■□□□□ 0.32
Sdf4Q61112 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdf4Q61112 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sdf4Q61112 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Gm13559-201ENSMUST00000120476 863 ntBASIC17.07■□□□□ 0.32
Sdf4Q61112 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.07■□□□□ 0.32
Sdf4Q61112 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.07■□□□□ 0.32
Sdf4Q61112 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sdf4Q61112 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Sdf4Q61112 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sdf4Q61112 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sdf4Q61112 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdf4Q61112 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdf4Q61112 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms