Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.27■□□□□ 0.36
Slc6a4Q60857 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a4Q60857 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a4Q60857 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.27■□□□□ 0.35
Slc6a4Q60857 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a4Q60857 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Slc6a4Q60857 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Slc6a4Q60857 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Gm18115-201ENSMUST00000221209 621 ntBASIC17.25■□□□□ 0.35
Slc6a4Q60857 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Slc6a4Q60857 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Gm44450-201ENSMUST00000199528 114 ntBASIC17.24■□□□□ 0.35
Slc6a4Q60857 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.24■□□□□ 0.35
Slc6a4Q60857 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Slc6a4Q60857 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.23■□□□□ 0.35
Slc6a4Q60857 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.23■□□□□ 0.35
Slc6a4Q60857 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Slc6a4Q60857 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.22■□□□□ 0.35
Slc6a4Q60857 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Slc6a4Q60857 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slc6a4Q60857 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.21■□□□□ 0.35
Slc6a4Q60857 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms