Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Tnfaip3Q60769 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Actl10-202ENSMUST00000226583 1501 ntBASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Gm26039-201ENSMUST00000158152 144 ntBASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tnfaip3Q60769 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Tnfaip3Q60769 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tnfaip3Q60769 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Tnfaip3Q60769 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.83■□□□□ 0.13
Tnfaip3Q60769 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tnfaip3Q60769 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Tnfaip3Q60769 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tnfaip3Q60769 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Gm25016-201ENSMUST00000158399 131 ntBASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfaip3Q60769 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Gm10566-201ENSMUST00000086739 996 ntBASIC15.81■□□□□ 0.12
Tnfaip3Q60769 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms