Protein–RNA interactions for Protein: Q60764

Mkrn3, Probable E3 ubiquitin-protein ligase makorin-3, mousemouse

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mkrn3Q60764 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mkrn3Q60764 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.83■□□□□ 0.6
Mkrn3Q60764 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.82■□□□□ 0.6
Mkrn3Q60764 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mkrn3Q60764 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.81■□□□□ 0.6
Mkrn3Q60764 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.81■□□□□ 0.6
Mkrn3Q60764 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mkrn3Q60764 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.8■□□□□ 0.6
Mkrn3Q60764 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mkrn3Q60764 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Gm10013-201ENSMUST00000106074 672 ntBASIC18.79■□□□□ 0.6
Mkrn3Q60764 Gm13474-201ENSMUST00000122466 815 ntBASIC18.79■□□□□ 0.6
Mkrn3Q60764 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.79■□□□□ 0.6
Mkrn3Q60764 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Gm19324-201ENSMUST00000213229 1169 ntBASIC18.79■□□□□ 0.6
Mkrn3Q60764 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mkrn3Q60764 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.78■□□□□ 0.6
Mkrn3Q60764 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.78■□□□□ 0.6
Mkrn3Q60764 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.78■□□□□ 0.6
Mkrn3Q60764 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mkrn3Q60764 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms