Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Shroom1Q5SX79 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Gm17807-201ENSMUST00000186869 298 ntBASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shroom1Q5SX79 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Gm17971-201ENSMUST00000190239 806 ntBASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Gm37722-201ENSMUST00000193757 208 ntBASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shroom1Q5SX79 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Gm27357-201ENSMUST00000183754 135 ntBASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Gm18669-201ENSMUST00000216049 778 ntBASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shroom1Q5SX79 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Shroom1Q5SX79 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shroom1Q5SX79 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Gm28033-201ENSMUST00000184224 96 ntBASIC17.89■□□□□ 0.45
Shroom1Q5SX79 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.89■□□□□ 0.45
Shroom1Q5SX79 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms