Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ctc1Q5SUQ9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ctc1Q5SUQ9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ctc1Q5SUQ9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ctc1Q5SUQ9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Ctc1Q5SUQ9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Gm22697-201ENSMUST00000175194 63 ntBASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ctc1Q5SUQ9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms