Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-2Q5R1I4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav6-2Q5R1I4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Birc2-201ENSMUST00000054878 378 ntBASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-2Q5R1I4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Gm28659-201ENSMUST00000188013 759 ntBASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Gm29707-201ENSMUST00000196325 491 ntBASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-2Q5R1I4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-2Q5R1I4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-2Q5R1I4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-2Q5R1I4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav6-2Q5R1I4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6-2Q5R1I4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms