Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav8d-1Q5R1H8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav8d-1Q5R1H8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav8d-1Q5R1H8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Gm22325-201ENSMUST00000158904 308 ntBASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8d-1Q5R1H8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8d-1Q5R1H8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8d-1Q5R1H8 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms